[[ https://salilab.org/modeller/ | Modeller Home ]] ===== Installation (ver 9.10) ===== * Download package from [[https://salilab.org/modeller/tutorial/basic.html | Modeller website]] * Unpack and run "./Install" * License Key: MODELIRANJE (works for version 8 and 9; not sure for higher version) * Set environment according the following notes: Use the /home/usr/share/modeller/bin/mod9.10 script to run Modeller. You probably want to add this directory to your PATH variable, or to create a symlink to some directory which is in the PATH, e.g. with the command: ln -sf /home/usr/share/modeller/bin/mod9.10 /usr/bin/ You can also use Modeller as a Python module, if you have Python installed (any version between 2.3 and 3.2). Do this using the script: /home/usr/share/modeller/bin/modpy.sh Simply add your regular Python command line after this script, e.g. /home/usr/share/modeller/bin/modpy.sh python myscript.py Alternatively, you could ensure that the following directories containing Python modules are in your Python path: /home/usr/share/modeller/modlib /home/usr/share/modeller/lib/i386-intel8 (for Python 2.3 or Python 2.4) /home/usr/share/modeller/lib/i386-intel8/python2.5 (for Python 2.5, 2.6, 2.7) /home/usr/share/modeller/lib/i386-intel8/python3.0 (for Python 3.0, 3.1) /home/usr/share/modeller/lib/i386-intel8/python3.2 (for Python 3.2) (e.g. by setting the PYTHONPATH environment variable) and that the following directory containing dynamic libraries is in your dynamic library search path: /home/usr/share/modeller/lib/i386-intel8 (e.g. by setting the LD_LIBRARY_PATH variable - LIBPATH on AIX systems). Ask your systems administrator for help if you wish to do this.