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workshop:timeline
2023
- NMR restraints in amber (by Lan Xiang on November 18th 2023)
- Introduction of CPPTARJ/PYTRAJ (by Banglong Wang on November 18th 2023)
- Github Copilot (by Yuankuan Zhang on December 2nd 2023)
- Weighted Histogram Analysis Method (by Lu Yan on December 2nd 2023)
2024
- Modified residued in Amber (by Yang Shen on January 13th 2024)
- Codes representation and sofware recommendation (by Zihang Zhou on January 13th 2024)
- Reproduction of SPOTRNA (by Haoren Qiu on March 23rd 2024)
- RNA secondary structure mapping by SHAPE (by Zhang Yikan on March 2nd 2024)
- NMR assignment (by Xu Ning on April 4th and May 11th, 2024)
2025
- Use of QuShape (by Zhang Yikan on June 14th 2025)
- DFT (by Zhang Yikan on October 11th 2025)
- PDBLib (by Prof. Xue on October 25th 2025)
- Reproduction of PCANN (by Haocheng Sun on November 22nd 2025)
- Nass (by Prof. Xue on December 6th 2025)
- Reproduction of GaMD: Use GaMD to study combining of RNA and ligand (by Yang Shen on December 27th 2025)
2026
- Protein Structure Prediction 1: Training of SPIRED (by Yuankuan Zhang, 20260117)
- Protein Structure Prediction 2: Algorithm of Attention (by Yuankuan Zhang, 20260117)
- DFT for chemical shift (by Prof. Xue, 20260131)
Todo
- Protein structure prediction (1) (by Yuankuan Zhang, 20260117)
- Protein structure prediction (2) (by Yuankuan Zhang, 20260131)
- FEP calculation (by Yaxuan Yuan, 20260228)
- Fitting methods (by Jianning Kang, 20260314)
workshop/timeline.txt · Last modified: 2026/02/05 10:25 by zhangyk
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