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workshop [2025/12/27 02:57] – zhangykworkshop [2026/02/05 10:33] (current) – zhangyk
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 +[[ workshop:timeline | Timeline ]]
 +
 ====== Deep Learning ====== ====== Deep Learning ======
-  * [[workshop:spotrna | Reproduction of SPOTRNA]] (by Haoren Qiu on March 23rd 2024) +  * [[workshop:spotrna | Reproduction of SPOTRNA]] (by Haoren Qiu, 20240323) 
-  * [[workshop:pcann | Reproduction of PCANN]] (by Haocheng Sun on November 22nd 2025)+  * [[workshop:pcann | Reproduction of PCANN]] (by Haocheng Sun, 20251122) 
 +  * [[workshop:pspred | Protein Structure Prediction 1: Training of SPIRED]] (by Yuankuan Zhang, 20260117) 
 +  * [[workshop:pspred-attention | Protein Structure Prediction 2: Algorithm of Attention]] (by Yuankuan Zhang, 20260124)
  
 ====== DFT ====== ====== DFT ======
-  * [[workshop:dft | DFT]] (by Zhang Yikan on October 11th 2025)+  * [[workshop:dft | DFT]] (by Yikan Zhang, 20251011) 
 +  * [[workshop:dft-cs | DFT for chemical shift]] (by Prof. Xue, 20260131)
  
 ====== Molecular Dynamics ====== ====== Molecular Dynamics ======
-  * [[workshop:gamd | Reproduction of GaMD: Use GaMD to study combining of RNA and ligand ]] (by Yang Shen on December 27th 2025) +  * [[workshop:nmr_restraints | NMR restraints in amber ]] (by Lan Xiang, 20231118) 
-  * [[workshop:modified_residue | Modified residued in Amber ]] (by Yang Shen on January 13th 2024) +  * [[workshop:cpptraj | Introduction of CPPTARJ/PYTRAJ ]] (by Banglong Wang, 20231118) 
-  * [[workshop:wham | Weighted Histogram Analysis Method ]] (by Lu Yan on December 2nd 2023) +  * [[workshop:wham | Weighted Histogram Analysis Method ]] (by Lu Yan, 20231202) 
-  * [[workshop:nmr_restraints | NMR restraints in amber ]] (by Lan Xiang on November 18th 2023) +  * [[workshop:modified_residue | Modified residued in Amber ]] (by Yang Shen. 20240113) 
-  * [[workshop:cpptraj | Introduction of CPPTARJ/PYTRAJ ]] (by Banglong Wang on November 18th 2023)+  * [[workshop:gamd | Reproduction of GaMD: Use GaMD to study combining of RNA and ligand ]] (by Yang Shen, 20251227)
  
 ====== NMR Assignment ====== ====== NMR Assignment ======
-  * [[workshop:nmr_assignment | NMR assignment]] (by Xu Ning on April 4th and May 11th, 2024)+  * [[workshop:nmr_assignment | NMR assignment]] (by Xu Ning, 20240404+20240511)
  
 ====== PDBLib ====== ====== PDBLib ======
-  * [[workshop:pdblib | PDBLib]] (by Prof. Xue on October 25th 2025) +  * [[workshop:pdblib | PDBLib]] (by Prof. Xue, 20251025) 
-  * [[workshop:nass | Nass]] (by Prof. Xue on December 6th 2025)+  * [[workshop:nass | Nass]] (by Prof. Xue, 20251206)
  
 ====== SHAPE ====== ====== SHAPE ======
-  * [[workshop:qushape | Use of QuShape]] (by Zhang Yikan on June 14th 2025) +  * [[workshop:qushape | Use of QuShape]] (by Zhang Yikan, 20250614) 
-  * [[workshop:shape | RNA secondary structure mapping by SHAPE]] (by Zhang Yikan on March 2nd 2024)+  * [[workshop:shape | RNA secondary structure mapping by SHAPE]] (by Zhang Yikan, 20240302)
  
 ====== Tools ====== ====== Tools ======
-  * [[workshop:aitools | Codes representation and sofware recommendation]] (by Zihang Zhou on January 13th 2024) +  * [[workshop:aitools | Codes representation and sofware recommendation]] (by Zihang Zhou, 20240113) 
-  * [[workshop:copilot | Github Copilot]] (by Yuankuan Zhang on December 2nd 2023)+  * [[workshop:copilot | Github Copilot]] (by Yuankuan Zhang, 20231202)
  
 ====== Older ones ====== ====== Older ones ======
workshop.1766804224.txt.gz · Last modified: 2025/12/27 02:57 by zhangyk

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